4GKV image
Deposition Date 2012-08-13
Release Date 2013-07-10
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4GKV
Keywords:
Title:
Structure of Escherichia coli AdhP (ethanol-inducible dehydrogenase) with bound NAD
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.01 Å
R-Value Free:
0.18
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Alcohol dehydrogenase, propanol-preferring
Gene (Uniprot):adhP
Chain IDs:A, B, C, D
Chain Length:336
Number of Molecules:4
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:cleaved peptide fragment corresponding to the C-terminal His tag
Chain IDs:E (auth: P)
Chain Length:10
Number of Molecules:1
Biological Source:Escherichia coli
Primary Citation
Structure of Escherichia coli AdhP (ethanol-inducible dehydrogenase) with bound NAD.
Acta Crystallogr.,Sect.F 69 730 732 (2013)
PMID: 23832197 DOI: 10.1107/S1744309113015170

Abstact

The crystal structure of AdhP, a recombinantly expressed alcohol dehydrogenase from Escherichia coli K-12 (substrain MG1655), was determined to 2.01 Å resolution. The structure, which was solved using molecular replacement, also included the structural and catalytic zinc ions and the cofactor nicotinamide adenine dinucleotide (NAD). The crystals belonged to space group P21, with unit-cell parameters a = 68.18, b = 118.92, c = 97.87 Å, β = 106.41°. The final R factor and Rfree were 0.138 and 0.184, respectively. The structure of the active site of AdhP suggested a number of residues that may participate in a proton relay, and the overall structure of AdhP, including the coordination to structural and active-site zinc ions, is similar to those of other tetrameric alcohol dehydrogenase enzymes.

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