4GJT image
Deposition Date 2012-08-10
Release Date 2012-10-10
Last Version Date 2024-10-30
Entry Detail
PDB ID:
4GJT
Title:
complex structure of nectin-4 bound to MV-H
Biological Source:
Source Organism:
Measles virus (Taxon ID: 645098)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
R-Value Free:
0.27
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin glycoprotein
Gene (Uniprot):H
Chain IDs:A
Chain Length:473
Number of Molecules:1
Biological Source:Measles virus
Polymer Type:polypeptide(L)
Molecule:Poliovirus receptor-related protein 4
Gene (Uniprot):NECTIN4
Chain IDs:B, C
Chain Length:123
Number of Molecules:2
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Structure of measles virus hemagglutinin bound to its epithelial receptor nectin-4
Nat.Struct.Mol.Biol. 20 67 72 (2013)
PMID: 23202587 DOI: 10.1038/nsmb.2432

Abstact

Measles virus is a major public health concern worldwide. Three measles virus cell receptors have been identified so far, and the structures of the first two in complex with measles virus hemagglutinin (MV-H) have been reported. Nectin-4 is the most recently identified receptor in epithelial cells, and its binding mode to MV-H remains elusive. In this study, we solved the structure of the membrane-distal domain of human nectin-4 in complex with MV-H. The structure shows that nectin-4 binds the MV-H β4-β5 groove exclusively via its N-terminal IgV domain; the contact interface is dominated by hydrophobic interactions. The binding site in MV-H for nectin-4 also overlaps extensively with those of the other two receptors. Finally, a hydrophobic pocket centered in the β4-β5 groove is involved in binding to all three identified measles virus receptors, representing a potential target for antiviral drugs.

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Primary Citation of related structures