4GGM image
Entry Detail
PDB ID:
4GGM
Keywords:
Title:
Structure of LpxI
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2012-08-06
Release Date:
2012-10-03
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
I 41 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:UDP-2,3-diacylglucosamine pyrophosphatase LpxI
Chain IDs:A (auth: X)
Chain Length:283
Number of Molecules:1
Biological Source:Caulobacter crescentus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Primary Citation
LpxI structures reveal how a lipid A precursor is synthesized.
Nat.Struct.Mol.Biol. 19 1132 1138 (2012)
PMID: 23042606 DOI: 10.1038/nsmb.2393

Abstact

Enzymes in lipid metabolism acquire and deliver hydrophobic substrates and products from within lipid bilayers. The structure at 2.55 Å of one isozyme of a constitutive enzyme in lipid A biosynthesis, LpxI from Caulobacter crescentus, has a novel fold. Two domains close around a completely sequestered substrate, UDP-2,3-diacylglucosamine, and open to release products either to the neighboring enzyme in a putative multienzyme complex or to the bilayer. Mutation analysis identifies Asp225 as key to Mg(2+)-catalyzed diphosphate hydrolysis. These structures provide snapshots of the enzymatic synthesis of a critical lipid A precursor.

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Primary Citation of related structures