4GGF image
Deposition Date 2012-08-06
Release Date 2013-02-20
Last Version Date 2023-09-13
Entry Detail
PDB ID:
4GGF
Title:
Crystal structure of Mn2+ bound calprotectin
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protein S100-A8
Gene (Uniprot):S100A8
Chain IDs:A, C (auth: K), E (auth: S), G (auth: U)
Chain Length:93
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Protein S100-A9
Gene (Uniprot):S100A9
Chain IDs:B (auth: C), D (auth: L), F (auth: T), H (auth: V)
Chain Length:114
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Molecular basis for manganese sequestration by calprotectin and roles in the innate immune response to invading bacterial pathogens.
Proc.Natl.Acad.Sci.USA 110 3841 3846 (2013)
PMID: 23431180 DOI: 10.1073/pnas.1220341110

Abstact

The S100A8/S100A9 heterodimer calprotectin (CP) functions in the host response to pathogens through a mechanism termed "nutritional immunity." CP binds Mn(2+) and Zn(2+) with high affinity and starves bacteria of these essential nutrients. Combining biophysical, structural, and microbiological analysis, we identified the molecular basis of Mn(2+) sequestration. The asymmetry of the CP heterodimer creates a single Mn(2+)-binding site from six histidine residues, which distinguishes CP from all other Mn(2+)-binding proteins. Analysis of CP mutants with altered metal-binding properties revealed that, despite both Mn(2+) and Zn(2+) being essential metals, maximal growth inhibition of multiple bacterial pathogens requires Mn(2+) sequestration. These data establish the importance of Mn(2+) sequestration in defense against infection, explain the broad-spectrum antimicrobial activity of CP relative to other S100 proteins, and clarify the impact of metal depletion on the innate immune response to infection.

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