4GFT image
Deposition Date 2012-08-03
Release Date 2013-07-03
Last Version Date 2024-10-09
Entry Detail
PDB ID:
4GFT
Title:
Malaria invasion machinery protein-Nanobody complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Myosin A tail domain interacting protein
Gene (Uniprot):PF3D7_1246400
Mutagens:C155S
Chain IDs:A
Chain Length:69
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Nanobody
Chain IDs:B
Chain Length:135
Number of Molecules:1
Biological Source:LAMA GLAMA
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PCA B GLN PYROGLUTAMIC ACID
Ligand Molecules
Primary Citation
The structure of the D3 domain of Plasmodium falciparum myosin tail interacting protein MTIP in complex with a nanobody.
Mol.Biochem.Parasitol. 190 87 91 (2013)
PMID: 23831371 DOI: 10.1016/j.molbiopara.2013.06.003

Abstact

Apicomplexan parasites enter host cells by many sophisticated steps including use of an ATP-powered invasion machinery. The machinery consists of multiple proteins, including a special myosin (MyoA) which moves along an actin fiber and which is connected to the myosin tail interaction protein (MTIP). Here we report a crystal structure of the major MyoA-binding domain (D3) of Plasmodium falciparum MTIP in complex with an anti-MTIP nanobody. In this complex, the MyoA-binding groove in MTIP-D3 is considerably less accessible than when occupied by the MyoA helix, due to a shift of two helices. The nanobody binds to an area slightly overlapping with the MyoA binding groove, covering a hydrophobic region next to the groove entrance. This provides a new avenue for arriving at compounds interfering with the invasion machinery since small molecules binding simultaneously to the nanobody binding site and the adjacent MyoA binding groove would prevent MyoA binding by MTIP.

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Protein

Chemical

Disease

Primary Citation of related structures