4G80 image
Deposition Date 2012-07-20
Release Date 2014-02-05
Last Version Date 2024-10-16
Entry Detail
PDB ID:
4G80
Title:
Crystal structure of voltage sensing domain of Ci-VSP with fragment antibody (WT, 3.8 A)
Biological Source:
Source Organism:
Ciona intestinalis (Taxon ID: 7719)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.58 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.25
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:fragment antibody heavy chain
Chain IDs:B (auth: A), D (auth: C), G (auth: E), I (auth: G)
Chain Length:224
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:fragment antibody light chain
Chain IDs:C (auth: B), E (auth: D), H (auth: F), J (auth: H)
Chain Length:211
Number of Molecules:4
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Voltage-sensor containing phosphatase
Chain IDs:A (auth: S), F (auth: T), K (auth: I), L (auth: J)
Chain Length:155
Number of Molecules:4
Biological Source:Ciona intestinalis
Ligand Molecules
Primary Citation
Structural mechanism of voltage-dependent gating in an isolated voltage-sensing domain.
Nat. Struct. Mol. Biol. 21 244 252 (2014)
PMID: 24487958 DOI: 10.1038/nsmb.2768

Abstact

The transduction of transmembrane electric fields into protein motion has an essential role in the generation and propagation of cellular signals. Voltage-sensing domains (VSDs) carry out these functions through reorientations of positive charges in the S4 helix. Here, we determined crystal structures of the Ciona intestinalis VSD (Ci-VSD) in putatively active and resting conformations. S4 undergoes an ~5-Å displacement along its main axis, accompanied by an ~60° rotation. This movement is stabilized by an exchange in countercharge partners in helices S1 and S3 that generates an estimated net charge transfer of ~1 eo. Gating charges move relative to a ''hydrophobic gasket' that electrically divides intra- and extracellular compartments. EPR spectroscopy confirms the limited nature of S4 movement in a membrane environment. These results provide an explicit mechanism for voltage sensing and set the basis for electromechanical coupling in voltage-dependent enzymes and ion channels.

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Primary Citation of related structures