4G3X image
Deposition Date 2012-07-15
Release Date 2013-07-17
Last Version Date 2023-09-13
Entry Detail
PDB ID:
4G3X
Title:
Crystal Structure of Q61L H-Ras-GppNHp bound to the RBD of Raf Kinase
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.25 Å
R-Value Free:
0.27
R-Value Work:
0.25
R-Value Observed:
0.27
Space Group:
P 3 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:GTPase HRas
Gene (Uniprot):HRAS
Mutations:Q61L
Chain IDs:A
Chain Length:166
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:RAF proto-oncogene serine/threonine-protein kinase
Gene (Uniprot):RAF1
Chain IDs:B
Chain Length:77
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Allosteric Effects of the Oncogenic RasQ61L Mutant on Raf-RBD.
Structure 23 505 516 (2015)
PMID: 25684575 DOI: 10.1016/j.str.2014.12.017

Abstact

The Ras/Raf/MEK/ERK signal transduction pathway is a major regulator of cell proliferation activated by Ras-guanosine triphosphate (GTP). The oncogenic mutant RasQ61L is not able to hydrolyze GTP in the presence of Raf and thus is a constitutive activator of this mitogenic pathway. The Ras/Raf interaction is essential for the activation of the Raf kinase domain through a currently unknown mechanism. We present the crystal structures of the Ras-GppNHp/Raf-RBD and RasQ61L-GppNHp/Raf-RBD complexes, which, in combination with MD simulations, reveal differences in allosteric interactions leading from the Ras/Raf interface to the Ras calcium-binding site and to the remote Raf-RBD loop L4. In the presence of Raf, the RasQ61L mutant has a rigid switch II relative to the wild-type and increased flexibility at the interface with switch I, which propagates across Raf-RBD. We show that in addition to local perturbations on Ras, RasQ61L has substantial long-range effects on the Ras allosteric lobe and on Raf-RBD.

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