4FYM image
Deposition Date 2012-07-05
Release Date 2013-08-07
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4FYM
Keywords:
Title:
Crystal structure of Plasmodium falciparum orotate phosphoribosyltransferase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Orotate phosphoribosyltransferase
Gene (Uniprot):oprt
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:266
Number of Molecules:8
Biological Source:Plasmodium falciparum
Ligand Molecules
Primary Citation
Structure of Plasmodium falciparum orotate phosphoribosyltransferase with autologous inhibitory protein-protein interactions.
Acta Crystallogr F Struct Biol Commun 71 600 608 (2015)
PMID: 25945715 DOI: 10.1107/S2053230X1500549X

Abstact

The most severe form of malaria is caused by the obligate parasite Plasmodium falciparum. Orotate phosphoribosyltransferase (OPRTase) is the fifth enzyme in the de novo pyrimidine-synthesis pathway in the parasite, which lacks salvage pathways. Among all of the malaria de novo pyrimidine-biosynthesis enzymes, the structure of P. falciparum OPRTase (PfOPRTase) was the only one unavailable until now. PfOPRTase that could be crystallized was obtained after some low-complexity sequences were removed. Four catalytic dimers were seen in the asymmetic unit (a total of eight polypeptides). In addition to revealing unique amino acids in the PfOPRTase active sites, asymmetric dimers in the larger structure pointed to novel parasite-specific protein-protein interactions that occlude the catalytic active sites. The latter could potentially modulate PfOPRTase activity in parasites and possibly provide new insights for blocking PfOPRTase functions.

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Protein

Chemical

Disease

Primary Citation of related structures