4FYF image
Deposition Date 2012-07-04
Release Date 2012-08-22
Last Version Date 2024-04-03
Entry Detail
PDB ID:
4FYF
Keywords:
Title:
Structural basis for substrate recognition by a novel Legionella phosphoinositide phosphatase
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.42 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SidF, inhibitor of growth family, member 3
Gene (Uniprot):sidF
Mutagens:C645S
Chain IDs:A
Chain Length:761
Number of Molecules:1
Biological Source:Legionella pneumophila subsp. pneumophila
Primary Citation
Structural basis for substrate recognition by a unique Legionella phosphoinositide phosphatase.
Proc.Natl.Acad.Sci.USA 109 13567 13572 (2012)
PMID: 22872863 DOI: 10.1073/pnas.1207903109

Abstact

Legionella pneumophila is an opportunistic intracellular pathogen that causes sporadic and epidemic cases of Legionnaires' disease. Emerging data suggest that Legionella infection involves the subversion of host phosphoinositide (PI) metabolism. However, how this bacterium actively manipulates PI lipids to benefit its infection is still an enigma. Here, we report that the L. pneumophila virulence factor SidF is a phosphatidylinositol polyphosphate 3-phosphatase that specifically hydrolyzes the D3 phosphate of PI(3,4)P(2) and PI(3,4,5)P(3). This activity is necessary for anchoring of PI(4)P-binding effectors to bacterial phagosomes. Crystal structures of SidF and its complex with its substrate PI(3,4)P(2) reveal striking conformational rearrangement of residues at the catalytic site to form a cationic pocket that specifically accommodates the D4 phosphate group of the substrate. Thus, our findings unveil a unique Legionella PI phosphatase essential for the establishment of lipid identity of bacterial phagosomes.

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