4FM4 image
Deposition Date 2012-06-15
Release Date 2012-08-22
Last Version Date 2024-11-27
Entry Detail
PDB ID:
4FM4
Keywords:
Title:
Wild Type Fe-type Nitrile Hydratase from Comamonas testosteroni Ni1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.38 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Nitrile hydratase alpha subunit
Chain IDs:A, C, E, G, I, K, M, O
Chain Length:209
Number of Molecules:8
Biological Source:Comamonas testosteroni
Polymer Type:polypeptide(L)
Molecule:Nitrile hydratase beta subunit
Chain IDs:B, D, F, H, J, L, N, P
Chain Length:206
Number of Molecules:8
Biological Source:Comamonas testosteroni
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSD A CYS 3-SULFINOALANINE
Primary Citation
The Fe-type nitrile hydratase from Comamonas testosteroni Ni1 does not require an activator accessory protein for expression in Escherichia coli.
Biochem.Biophys.Res.Commun. 424 365 370 (2012)
PMID: 22713452 DOI: 10.1016/j.bbrc.2012.06.036

Abstact

We report herein the functional expression of an Fe-type nitrile hydratase (NHase) without the co-expression of an activator protein or the Escherichia coli chaperone proteins GroES/EL. Soluble protein was obtained when the α- and β-subunit genes of the Fe-type NHase Comamonas testosteroni Ni1 (CtNHase) were synthesized with optimized E. coli codon usage and co-expressed. As a control, the Fe-type NHase from Rhodococcus equi TG328-2 (ReNHase) was expressed with (ReNHase(+Act)) and without (ReNHase(-Act)) its activator protein, establishing that expression of a fully functional, metallated ReNHase enzyme requires the co-expression of its activator protein, similar to all other Fe-type NHase enzymes reported to date, whereas the CtNHase does not. The X-ray crystal structure of CtNHase was determined to 2.4Å resolution revealing an αβ heterodimer, similar to other Fe-type NHase enzymes, except for two important differences. First, two His residues reside in the CtNHase active site that are not observed in other Fe-type NHase enzymes and second, the active site Fe(III) ion resides at the bottom of a wide solvent exposed channel. The solvent exposed active site, along with the two active site histidine residues, are hypothesized to play a role in iron incorporation in the absence of an activator protein.

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Primary Citation of related structures