4FDK image
Deposition Date 2012-05-28
Release Date 2013-08-28
Last Version Date 2023-09-13
Entry Detail
PDB ID:
4FDK
Title:
F78L Tt H-NOX
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.23
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Methyl-accepting chemotaxis protein
Gene (Uniprot):Tar4
Mutations:F78L
Chain IDs:A, B
Chain Length:188
Number of Molecules:2
Biological Source:Thermoanaerobacter tengcongensis
Primary Citation
Porphyrin pi-stacking in a heme protein scaffold tunes gas ligand affinity.
J.Inorg.Biochem. 127C 7 12 (2013)
PMID: 23831583 DOI: 10.1016/j.jinorgbio.2013.06.004

Abstact

The role of π-stacking in controlling redox and ligand binding properties of porphyrins has been of interest for many years. The recent discovery of H-NOX domains has provided a model system to investigate the role of porphyrin π-stacking within a heme protein scaffold. Removal of a phenylalanine-porphyrin π-stack dramatically increased O2, NO, and CO affinities and caused changes in redox potential (~40mV) without any structural changes. These results suggest that small changes in redox potential affect ligand affinity and that π-stacking may provide a novel route to engineer heme protein properties for new functions.

Legend

Protein

Chemical

Disease

Primary Citation of related structures