4F8Z image
Deposition Date 2012-05-18
Release Date 2013-05-22
Last Version Date 2024-11-27
Entry Detail
PDB ID:
4F8Z
Keywords:
Title:
Carboxypeptidase T with Boc-Leu
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.38 Å
R-Value Free:
0.15
R-Value Work:
0.13
R-Value Observed:
0.13
Space Group:
P 63 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Carboxypeptidase T
Gene (Uniprot):cpt
Chain IDs:A
Chain Length:323
Number of Molecules:1
Biological Source:Thermoactinomyces vulgaris
Primary Citation
Three-dimensional structure of carboxypeptidase T from Thermoactinomyces vulgaris in complex with N-BOC-L-leucine.
Biochemistry Mosc. 78 252 259 (2013)
PMID: 23586718 DOI: 10.1134/S0006297913030061

Abstact

The 3D structure of recombinant bacterial carboxypeptidase T (CPT) in complex with N-BOC-L-leucine was determined at 1.38 Å resolution. Crystals for the X-ray study were grown in microgravity using the counter-diffusion technique. N-BOC-L-leucine and SO4(2-) ion bound in the enzyme active site were localized in the electron density map. Location of the leucine side chain in CPT-N-BOC-L-leucine complex allowed identification of the S1 subsite of the enzyme, and its structure was determined. Superposition of the structures of CPT-N-BOC-L-leucine complex and complexes of pancreatic carboxypeptidases A and B with substrate and inhibitors was carried out, and similarity of the S1 subsites in these three carboxypeptidases was revealed. It was found that SO4(2-) ion occupies the same position in the S1' subsite as the C-terminal carboxy group of the substrate.

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Primary Citation of related structures