4F88 image
Entry Detail
PDB ID:
4F88
Title:
X-ray Crystal Structure of PlyC
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2012-05-17
Release Date:
2012-07-25
Method Details:
Experimental Method:
Resolution:
3.30 Å
R-Value Free:
0.29
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:PlyCA
Chain IDs:A (auth: 1), B (auth: 2)
Chain Length:465
Number of Molecules:2
Biological Source:Streptococcus phage C1
Polymer Type:polypeptide(L)
Description:PlyCB
Chain IDs:C (auth: A), D (auth: B), E (auth: C), F (auth: D), G (auth: E), H (auth: F), I (auth: G), J (auth: H), K (auth: I), L (auth: J), M (auth: K), N (auth: L), O (auth: M), P (auth: N), Q (auth: O), R (auth: P)
Chain Length:72
Number of Molecules:16
Biological Source:Streptococcus phage C1
Ligand Molecules
Primary Citation
X-ray crystal structure of the streptococcal specific phage lysin PlyC.
Proc.Natl.Acad.Sci.USA 109 12752 12757 (2012)
PMID: 22807482 DOI: 10.1073/pnas.1208424109

Abstact

Bacteriophages deploy lysins that degrade the bacterial cell wall and facilitate virus egress from the host. When applied exogenously, these enzymes destroy susceptible microbes and, accordingly, have potential as therapeutic agents. The most potent lysin identified to date is PlyC, an enzyme assembled from two components (PlyCA and PlyCB) that is specific for streptococcal species. Here the structure of the PlyC holoenzyme reveals that a single PlyCA moiety is tethered to a ring-shaped assembly of eight PlyCB molecules. Structure-guided mutagenesis reveals that the bacterial cell wall binding is achieved through a cleft on PlyCB. Unexpectedly, our structural data reveal that PlyCA contains a glycoside hydrolase domain in addition to the previously recognized cysteine, histidine-dependent amidohydrolases/peptidases catalytic domain. The presence of eight cell wall-binding domains together with two catalytic domains may explain the extraordinary potency of the PlyC holoenyzme toward target bacteria.

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Primary Citation of related structures