4EYY image
Entry Detail
PDB ID:
4EYY
Keywords:
Title:
Crystal Structure of the IcmR-IcmQ complex from Legionella pneumophila
Biological Source:
PDB Version:
Deposition Date:
2012-05-02
Release Date:
2013-05-22
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:IcmQ
Mutations:K57Q, K59Q, R67Q, R71Q
Chain IDs:B (auth: Q)
Chain Length:191
Number of Molecules:1
Biological Source:Legionella pneumophila
Polymer Type:polypeptide(L)
Description:IcmR
Chain IDs:A (auth: R)
Chain Length:120
Number of Molecules:1
Biological Source:Legionella pneumophila subsp. pneumophila
Primary Citation
IcmQ in the Type 4b secretion system contains an NAD+ binding domain.
Structure 21 1361 1373 (2013)
PMID: 23850453 DOI: 10.1016/j.str.2013.05.017

Abstact

A Type 4b secretion system (T4bSS) is required for Legionella growth in alveolar macrophages. IcmQ associates with IcmR, binds to membranes, and has a critical role in the T4bSS. We have now solved a crystal structure of IcmR-IcmQ to further our understanding of this complex. This structure revealed an amphipathic four-helix bundle, formed by IcmR and the N-terminal domain of IcmQ, which is linked to a novel C-terminal domain of IcmQ (Qc) by a linker helix. The Qc domain has structural homology with ADP ribosyltransferase domains in certain bacterial toxins and binds NAD(+) with a dissociation constant in the physiological range. Structural homology and molecular dynamics were used to identify an extended NAD(+) binding site on Qc, and the resulting model was tested by mutagenesis and binding assays. Based on the data, we suggest that IcmR-IcmQ binds to membranes, where it may interact with, or perhaps modify, a protein in the T4bSS when NAD(+) is bound.

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