4EQ4 image
Deposition Date 2012-04-18
Release Date 2012-06-20
Last Version Date 2024-10-09
Entry Detail
PDB ID:
4EQ4
Keywords:
Title:
Crystal structure of seleno-methionine derivatized GH3.12
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.07 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:4-substituted benzoates-glutamate ligase GH3.12
Gene (Uniprot):GH3.12
Chain IDs:A, B
Chain Length:581
Number of Molecules:2
Biological Source:Arabidopsis thaliana
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Primary Citation
Structural basis for prereceptor modulation of plant hormones by GH3 proteins.
Science 336 1708 1711 (2012)
PMID: 22628555 DOI: 10.1126/science.1221863

Abstact

Acyl acid amido synthetases of the GH3 family act as critical prereceptor modulators of plant hormone action; however, the molecular basis for their hormone selectivity is unclear. Here, we report the crystal structures of benzoate-specific Arabidopsis thaliana AtGH3.12/PBS3 and jasmonic acid-specific AtGH3.11/JAR1. These structures, combined with biochemical analysis, define features for the conjugation of amino acids to diverse acyl acid substrates and highlight the importance of conformational changes in the carboxyl-terminal domain for catalysis. We also identify residues forming the acyl acid binding site across the GH3 family and residues critical for amino acid recognition. Our results demonstrate how a highly adaptable three-dimensional scaffold is used for the evolution of promiscuous activity across an enzyme family for modulation of plant signaling molecules.

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Primary Citation of related structures
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