4EPQ image
Deposition Date 2012-04-17
Release Date 2012-06-13
Last Version Date 2023-09-13
Entry Detail
PDB ID:
4EPQ
Title:
canonical poly(ADP-ribose) glycohydrolase RBPI inhibitor complex from Tetrahymena thermophila
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.23
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 41
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Poly(ADP-ribose) glycohydrolase
Chain IDs:A
Chain Length:477
Number of Molecules:1
Biological Source:Tetrahymena thermophila
Ligand Molecules
Primary Citation
Structure and mechanism of a canonical poly(ADP-ribose) glycohydrolase.
Nat Commun 3 878 878 (2012)
PMID: 22673905 DOI: 10.1038/ncomms1889

Abstact

Poly(ADP-ribosyl)ation is a reversible post-translational protein modification involved in the regulation of a number of cellular processes including DNA repair, chromatin structure, mitosis, transcription, checkpoint activation, apoptosis and asexual development. The reversion of poly(ADP-ribosyl)ation is catalysed by poly(ADP-ribose) (PAR) glycohydrolase (PARG), which specifically targets the unique PAR (1''-2') ribose-ribose bonds. Here we report the structure and mechanism of the first canonical PARG from the protozoan Tetrahymena thermophila. In addition, we reveal the structure of T. thermophila PARG in a complex with a novel rhodanine-containing mammalian PARG inhibitor RBPI-3. Our data demonstrate that the protozoan PARG represents a good model for human PARG and is therefore likely to prove useful in guiding structure-based discovery of new classes of PARG inhibitors.

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Chemical

Disease

Primary Citation of related structures