4EN6 image
Deposition Date 2012-04-12
Release Date 2012-06-06
Last Version Date 2023-11-08
Entry Detail
PDB ID:
4EN6
Title:
Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-3-sialyllactose
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.56 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 63
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin components HA-22/23/53
Gene (Uniprot):HA-70
Chain IDs:A
Chain Length:224
Number of Molecules:1
Biological Source:Clostridium botulinum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin components HA-22/23/53
Gene (Uniprot):HA-70
Chain IDs:B
Chain Length:420
Number of Molecules:1
Biological Source:Clostridium botulinum
Ligand Molecules
Primary Citation
Carbohydrate recognition mechanism of HA70 from Clostridium botulinum deduced from X-ray structures in complexes with sialylated oligosaccharides
Febs Lett. 586 2404 2410 (2012)
PMID: 22684008 DOI: 10.1016/j.febslet.2012.05.055

Abstact

Clostridium botulinum produces the botulinum neurotoxin, forming a large complex as progenitor toxins in association with non-toxic non-hemagglutinin and/or several different hemagglutinin (HA) subcomponents, HA33, HA17 and HA70, which bind to carbohydrate of glycoproteins from epithelial cells in the infection process. To elucidate the carbohydrate recognition mechanism of HA70, X-ray structures of HA70 from type C toxin (HA70/C) in complexes with sialylated oligosaccharides were determined, and a binding assay by the glycoconjugate microarray was performed. These results suggested that HA70/C can recognize both α2-3- and α2-6-sialylated oligosaccharides, and that it has a higher affinity for α2-3-sialylated oligosaccharides.

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Primary Citation of related structures