4EBF image
Deposition Date 2012-03-23
Release Date 2012-05-30
Last Version Date 2024-11-20
Entry Detail
PDB ID:
4EBF
Keywords:
Title:
SeMet thermostable phosphite dehydrogenase Glu175-Ala mutant
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.27
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Thermostable phosphite dehydrogenase
Mutations:Thermostable variant, E175A
Chain IDs:A, B, C, D, E, F
Chain Length:334
Number of Molecules:6
Biological Source:Pseudomonas stutzeri
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
Crystal structures of phosphite dehydrogenase provide insights into nicotinamide cofactor regeneration.
Biochemistry 51 4263 4270 (2012)
PMID: 22564171 DOI: 10.1021/bi2016926

Abstact

The enzyme phosphite dehydrogenase (PTDH) catalyzes the NAD(+)-dependent conversion of phosphite to phosphate and represents the first biological catalyst that has been shown to conduct the enzymatic oxidation of phosphorus. Despite investigation for more than a decade into both the mechanism of its unusual reaction and its utility in cofactor regeneration, there has been a lack of any structural data for PTDH. Here we present the cocrystal structure of an engineered thermostable variant of PTDH bound to NAD(+) (1.7 Å resolution), as well as four other cocrystal structures of thermostable PTDH and its variants with different ligands (all between 1.85 and 2.3 Å resolution). These structures provide a molecular framework for understanding prior mutational analysis and point to additional residues, located in the active site, that may contribute to the enzymatic activity of this highly unusual catalyst.

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Primary Citation of related structures