4DVA image
Deposition Date 2012-02-23
Release Date 2013-01-16
Last Version Date 2024-11-20
Entry Detail
PDB ID:
4DVA
Keywords:
Title:
The crystal structure of human urokinase-type plasminogen activator catalytic domain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.94 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
H 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Urokinase-type plasminogen activator
Gene (Uniprot):PLAU
Mutations:C122A, N145Q
Chain IDs:A (auth: U)
Chain Length:246
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Rezymogenation of active urokinase induced by an inhibitory antibody
Biochem.J. 449 161 166 (2013)
PMID: 23016918 DOI: 10.1042/BJ20121132

Abstact

An important regulatory mechanism of serine proteases is the proteolytic conversion of the inactive pro-enzyme, or zymogen, into the active enzyme. This activation process is generally considered an irreversible process. In the present study, we demonstrate that an active enzyme can be converted back into its zymogen form. We determined the crystal structure of uPA (urokinase-type plasminogen activator) in complex with an inhibitory antibody, revealing that the antibody 'rezymogenizes' already activated uPA. The present study demonstrates a new regulatory mechanism of protease activity, which is also an extreme case of protein allostery. Mechanistically, the antibody binds a single surface-exposed loop, named the autolysis loop, thereby preventing the stabilization of uPA in its active conformation. We argue that this autolysis loop is a key structural element for rezymogenation of other proteases, and will be a new target site for pharmacological intervention with serine protease activity.

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