ISDA: 4DJX

Deposition Date 2012-02-02

Release Date 2012-03-21

Last Version Date 2024-11-27

Entry Detail

PDB ID:

4DJX

Keywords:

HYDROLASE/HYDROLASE INHIBITOR

Title:

Structure of BACE Bound to 5-(3-(5-chloropyridin-3-yl)phenyl)-5-cyclopropyl-2-imino-3-methylimidazolidin-4-one

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.50 Å

R-Value Free:

0.20

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 21 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Beta-secretase 1
Gene (Uniprot):BACE1
Chain IDs:A, B
Chain Length:414
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:P56817 Pfam ID:PF00026 EC:3.4.23.46

Ligand Molecules

0KQ

TLA

Primary Citation

Structure based design of iminohydantoin BACE1 inhibitors: Identification of an orally available, centrally active BACE1 inhibitor.

Cumming, J.N, Smith, E.M, Wang, L, Misiaszek, J, Durkin, J, Pan, J, Iserloh, U, Wu, Y, Zhu, Z, Strickland, C, Voigt, J, Chen, X, Kennedy, M.E, Kuvelkar, R, Hyde, L.A, Cox, K, Favreau, L, Czarniecki, M.F, Greenlee, W.J, McKittrick, B.A, Parker, E.M, Stamford, A.W.Show

Bioorg.Med.Chem.Lett. 22 2444 2449 (2012)

PMID: 22390835 DOI: 10.1016/j.bmcl.2012.02.013

Abstact

From an initial lead 1, a structure-based design approach led to identification of a novel, high-affinity iminohydantoin BACE1 inhibitor that lowers CNS-derived Aβ following oral administration to rats. Herein we report SAR development in the S3 and F' subsites of BACE1 for this series, the synthetic approaches employed in this effort, and in vivo data for the optimized compound.

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