4D52 image
Entry Detail
PDB ID:
4D52
Title:
CRYSTAL STRUCTURE OF FUCOSE BINDING LECTIN FROM ASPERGILLUS FUMIGATUS (AFL) IN COMPLEX WITH L-GALACTOPYRANOSE.
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2014-11-01
Release Date:
2015-03-11
Method Details:
Experimental Method:
Resolution:
1.76 Å
R-Value Free:
0.17
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:FUCOSE-SPECIFIC LECTIN FLEA
Chain IDs:A
Chain Length:315
Number of Molecules:1
Biological Source:ASPERGILLUS FUMIGATUS
Polymer Type:polypeptide(L)
Description:FUCOSE-SPECIFIC LECTIN FLEA
Chain IDs:B, D
Chain Length:315
Number of Molecules:2
Biological Source:ASPERGILLUS FUMIGATUS
Polymer Type:polypeptide(L)
Description:FUCOSE-SPECIFIC LECTIN FLEA
Chain IDs:C
Chain Length:315
Number of Molecules:1
Biological Source:ASPERGILLUS FUMIGATUS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSD B CYS 3-SULFINOALANINE
Primary Citation
Structural Insights Into Aspergillus Fumigatus Lectin Specificity: Afl Binding Sites are Functionally Non-Equivalent.
Acta Crystallogr.,Sect.D 71 442 ? (2015)
PMID: 25760594 DOI: 10.1107/S1399004714026595

Abstact

The Aspergillus fumigatus lectin AFL was recently described as a new member of the AAL lectin family. As a lectin from an opportunistic pathogen, it might play an important role in the interaction of the pathogen with the human host. A detailed study of structures of AFL complexed with several monosaccharides and oligosaccharides, including blood-group epitopes, was combined with affinity data from SPR and discussed in the context of previous findings. Its six binding sites are non-equivalent, and owing to minor differences in amino-acid composition they exhibit a marked difference in specific ligand recognition. AFL displays a high affinity in the micromolar range towards oligosaccharides which were detected in plants and also those bound on the human epithelia. All of these results indicate AFL to be a complex member of the lectin family and a challenging target for future medical research and, owing to its binding properties, a potentially useful tool in specific biotechnological applications.

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Primary Citation of related structures