4D3M image
Deposition Date 2014-10-23
Release Date 2015-01-14
Last Version Date 2023-12-20
Entry Detail
PDB ID:
4D3M
Keywords:
Title:
Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 3-(2-(6-Amino-4-methylpyridin-2-yl)ethyl)-5-(2-(4-methyl-6-(methylamino)pyridin-2-yl)ethyl)benzonitrile
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.74 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:NITRIC OXIDE SYNTHASE OXYGENASE
Gene (Uniprot):nos
Mutagens:YES
Chain IDs:A
Chain Length:363
Number of Molecules:1
Biological Source:BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168
Primary Citation
Structure-based design of bacterial nitric oxide synthase inhibitors.
J. Med. Chem. 58 994 1004 (2015)
PMID: 25522110 DOI: 10.1021/jm501723p

Abstact

Inhibition of bacterial nitric oxide synthase (bNOS) has the potential to improve the efficacy of antimicrobials used to treat infections by Gram-positive pathogens Staphylococcus aureus and Bacillus anthracis. However, inhibitor specificity toward bNOS over the mammalian NOS (mNOS) isoforms remains a challenge because of the near identical NOS active sites. One key structural difference between the NOS isoforms is the amino acid composition of the pterin cofactor binding site that is adjacent to the NOS active site. Previously, we demonstrated that a NOS inhibitor targeting both the active and pterin sites was potent and functioned as an antimicrobial (Holden , , Proc. Natl. Acad. Sci. U.S.A. 2013 , 110 , 18127). Here we present additional crystal structures, binding analyses, and bacterial killing studies of inhibitors that target both the active and pterin sites of a bNOS and function as antimicrobials. Together, these data provide a framework for continued development of bNOS inhibitors, as each molecule represents an excellent chemical scaffold for the design of isoform selective bNOS inhibitors.

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