4D0M image
Deposition Date 2014-04-29
Release Date 2014-05-28
Last Version Date 2023-12-20
Entry Detail
PDB ID:
4D0M
Title:
Phosphatidylinositol 4-kinase III beta in a complex with Rab11a-GTP- gamma-S and the Rab-binding domain of FIP3
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
6.00 Å
R-Value Free:
0.35
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PHOSPHATIDYLINOSITOL 4-KINASE BETA
Gene (Uniprot):PI4KB
Mutations:YES
Chain IDs:A, C, G, I, M, O, Q, S, W, Y, CA (auth: c), GA (auth: g)
Chain Length:48
Number of Molecules:12
Biological Source:HOMO SAPIENS
Polymer Type:polypeptide(L)
Molecule:RAS-RELATED PROTEIN RAB-11A
Gene (Uniprot):RAB11A
Mutations:YES
Chain IDs:B, D, H, J, N, P, R, T, X, Z, DA (auth: d), HA (auth: h)
Chain Length:48
Number of Molecules:12
Biological Source:HOMO SAPIENS
Polymer Type:polypeptide(L)
Molecule:RAB11 FAMILY-INTERACTING PROTEIN 3
Gene (Uniprot):RAB11FIP3
Mutations:YES
Chain IDs:E, F, K, L, U, V, AA (auth: a), BA (auth: b), EA (auth: e), FA (auth: f), IA (auth: i), JA (auth: j)
Chain Length:48
Number of Molecules:12
Biological Source:HOMO SAPIENS
Primary Citation
Structures of Pi4Kiiibeta Complexes Show Simultaneous Recruitment of Rab11 and its Effectors.
Science 344 1035 ? (2014)
PMID: 24876499 DOI: 10.1126/SCIENCE.1253397

Abstact

Phosphatidylinositol 4-kinases (PI4Ks) and small guanosine triphosphatases (GTPases) are essential for processes that require expansion and remodeling of phosphatidylinositol 4-phosphate (PI4P)-containing membranes, including cytokinesis, intracellular development of malarial pathogens, and replication of a wide range of RNA viruses. However, the structural basis for coordination of PI4K, GTPases, and their effectors is unknown. Here, we describe structures of PI4Kβ (PI4KIIIβ) bound to the small GTPase Rab11a without and with the Rab11 effector protein FIP3. The Rab11-PI4KIIIβ interface is distinct compared with known structures of Rab complexes and does not involve switch regions used by GTPase effectors. Our data provide a mechanism for how PI4KIIIβ coordinates Rab11 and its effectors on PI4P-enriched membranes and also provide strategies for the design of specific inhibitors that could potentially target plasmodial PI4KIIIβ to combat malaria.

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Primary Citation of related structures