ISDA

Deposition Date 2014-04-24

Release Date 2014-08-06

Last Version Date 2024-05-01

Entry Detail

PDB ID:

4D09

Keywords:

HYDROLASE

Title:

PDE2a catalytic domain in complex with a brain penetrant inhibitor

Biological Source:

Source Organism:

HOMO SAPIENS (Taxon ID: 9606)

Host Organism:

SPODOPTERA FRUGIPERDA

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.50 Å

R-Value Free:

0.27

R-Value Work:

0.20

R-Value Observed:

0.21

Space Group:

P 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:CGMP-DEPENDENT 3', 5'-CYCLIC PHOSPHODIESTERASE
Gene (Uniprot):PDE2A
Chain IDs:A, B, C, D
Chain Length:353
Number of Molecules:4
Biological Source:HOMO SAPIENS

UniProt ID:O00408 Pfam ID:PF00233 EC:3.1.4.17

Ligand Molecules

788

Primary Citation

Structure-Based Design of a Potent, Selective, and Brain Penetrating Pde2 Inhibitor with Demonstrated Target Engagement.

Buijnsters, P, De Angelis, M, Langlois, X, Rombouts, F.J.R, Sanderson, W, Tresadern, G, Ritchie, A, Trabanco, A.A, Vanhoof, G, Roosbroeck, Y.V, Andres, J.Show

Acs Med.Chem.Lett. 5 1049 ? (2014)

PMID: 25221665 DOI: 10.1021/ML500262U

Abstact

Structure-guided design led to the identification of the novel, potent, and selective phosphodiesterase 2 (PDE2) inhibitor 12. Compound 12 demonstrated a >210-fold selectivity versus PDE10 and PDE11 and was inactive against all other PDE family members up to 10 μM. In vivo evaluation of 12 provided evidence that it is able to engage the target and to increase cGMP levels in relevant brain regions. Hence, 12 is a valuable tool compound for the better understanding of the role of PDE2 in cognitive impairment and other central nervous system related disorders.

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