4CSF image
Entry Detail
PDB ID:
4CSF
Title:
Structural insights into Toscana virus RNA encapsidation
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2014-03-07
Release Date:
2014-04-09
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:NUCLEOPROTEIN
Chain IDs:A, B, D, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W
Chain Length:253
Number of Molecules:21
Biological Source:TOSCANA VIRUS
Polymer Type:polypeptide(L)
Description:NUCLEOPROTEIN
Chain IDs:C, X
Chain Length:253
Number of Molecules:2
Biological Source:TOSCANA VIRUS
Polymer Type:polypeptide(L)
Description:NUCLEOPROTEIN
Chain IDs:E
Chain Length:253
Number of Molecules:1
Biological Source:TOSCANA VIRUS
Polymer Type:polyribonucleotide
Description:RNA (5'-R(*UP*GP*UP*GP*UP*UP*UP*CP*UP)-3')
Chain IDs:Y (auth: a), Z (auth: c), AA (auth: e), BA (auth: g), CA (auth: i), DA (auth: k), EA (auth: m), FA (auth: o), GA (auth: q), HA (auth: s), IA (auth: u), JA (auth: w)
Chain Length:253
Number of Molecules:12
Biological Source:SYNTHETIC CONSTRUCT
Primary Citation
Structural Insights Into RNA Encapsidation and Helical Assembly of the Toscana Virus Nucleoprotein.
Nucleic Acids Res. 42 6025 ? (2014)
PMID: 24688060 DOI: 10.1093/NAR/GKU229

Abstact

Toscana virus is an emerging bunyavirus in Mediterranean Europe where it accounts for 80% of pediatric meningitis cases during the summer. The negative-strand ribonucleic acid (RNA) genome of the virus is wrapped around the virally encoded nucleoprotein N to form the ribonucleoprotein complex (RNP). We determined crystal structures of hexameric N alone (apo) and in complex with a nonameric single-stranded RNA. RNA is sequestered in a sequence-independent fashion in a deep groove inside the hexamer. At the junction between two adjacent copies of Ns, RNA binding induced an inter-subunit rotation, which opened the RNA-binding tunnel and created a new assembly interface at the outside of the hexamer. Based on these findings, we suggest a structural model for how binding of RNA to N promotes the formation of helical RNPs, which are a characteristic hallmark of many negative-strand RNA viruses.

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Primary Citation of related structures