4CML image
Deposition Date 2014-01-16
Release Date 2014-04-16
Last Version Date 2023-12-20
Entry Detail
PDB ID:
4CML
Keywords:
Title:
Crystal Structure of INPP5B in complex with Phosphatidylinositol 3,4- bisphosphate
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TYPE II INOSITOL 1,4,5-TRISPHOSPHATE 5- PHOSPHATASE, ISOFORM 2
Gene (Uniprot):INPP5B
Chain IDs:A
Chain Length:313
Number of Molecules:1
Biological Source:HOMO SAPIENS
Primary Citation
Structural Basis for Phosphoinositide Substrate Recognition, Catalysis, and Membrane Interactions in Human Inositol Polyphosphate 5-Phosphatases.
Structure 22 744 ? (2014)
PMID: 24704254 DOI: 10.1016/J.STR.2014.01.013

Abstact

SHIP2, OCRL, and INPP5B belong to inositol polyphosphate 5-phophatase subfamilies involved in insulin regulation and Lowes syndrome. The structural basis for membrane recognition, substrate specificity, and regulation of inositol polyphosphate 5-phophatases is still poorly understood. We determined the crystal structures of human SHIP2, OCRL, and INPP5B, the latter in complex with phosphoinositide substrate analogs, which revealed a membrane interaction patch likely to assist in sequestering substrates from the lipid bilayer. Residues recognizing the 1-phosphate of the substrates are highly conserved among human family members, suggesting similar substrate binding modes. However, 3- and 4-phosphate recognition varies and determines individual substrate specificity profiles. The high conservation of the environment of the scissile 5-phosphate suggests a common reaction geometry for all members of the human 5-phosphatase family.

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Primary Citation of related structures