ISDA: 4CDE

Deposition Date 2013-10-31

Release Date 2014-03-19

Last Version Date 2024-10-09

Entry Detail

PDB ID:

4CDE

Keywords:

HYDROLASE

Title:

Human DPP1 in complex with 4-amino-N-((1S)-1-cyano-2-(4-(4- cyanophenyl)phenyl)ethyl)tetrahydropyran-4-carboxamide

Biological Source:

Source Organism:

HOMO SAPIENS (Taxon ID: 9606)

Host Organism:

SPODOPTERA FRUGIPERDA

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.40 Å

R-Value Free:

0.24

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 31 2 1

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DIPEPTIDYL PEPTIDASE 1 EXCLUSION DOMAIN CHAIN
Gene (Uniprot):CTSC
Chain IDs:A, D
Chain Length:119
Number of Molecules:2
Biological Source:HOMO SAPIENS

UniProt ID:P53634 Pfam ID:PF08773, PF00112 EC:3.4.14.1

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DIPEPTIDYL PEPTIDASE 1 HEAVY CHAIN
Gene (Uniprot):CTSC
Chain IDs:B, E
Chain Length:165
Number of Molecules:2
Biological Source:HOMO SAPIENS

UniProt ID:P53634 Pfam ID:PF08773, PF00112 EC:3.4.14.1

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DIPEPTIDYL PEPTIDASE 1 LIGHT CHAIN
Gene (Uniprot):CTSC
Chain IDs:C, F
Chain Length:69
Number of Molecules:2
Biological Source:HOMO SAPIENS

UniProt ID:P53634 Pfam ID:PF08773, PF00112 EC:3.4.14.1

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
ASN	A	ASN	GLYCOSYLATION SITE

Ligand Molecules

NAG

U6B

Primary Citation

Cathepsin C Inhibitors: Property Optimization and Identification of a Clinical Candidate.

Furber, M, Gardiner, P, Tiden, A.K, Mete, A, Ford, R, Millichip, I, Stein, L, Mather, A, Kinchin, E, Luckhurst, C, Barber, S, Cage, P, Sanganee, H, Austin, R, Chohan, K, Beri, R, Thong, B, Wallace, A, Oreffo, V, Hutchinson, R, Harper, S, Debreczeni, J, Breed, J, Wissler, L, Edman, K.Show

J.Med.Chem. 57 2357 ? (2014)

PMID: 24592859 DOI: 10.1021/JM401705G

Abstact

A lead generation and optimization program delivered the highly selective and potent CatC inhibitor 10 as an in vivo tool compound and potential development candidate. Structural studies were undertaken to generate SAR understanding.

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Protein

Chemical

Disease

Primary Citation of related structures

Abstact

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