4C2X image
Deposition Date 2013-08-20
Release Date 2014-10-01
Last Version Date 2023-12-20
Entry Detail
PDB ID:
4C2X
Keywords:
Title:
Human N-myristoyltransferase isoform 2 (NMT2)
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.33 Å
R-Value Free:
0.28
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 2
Gene (Uniprot):NMT2
Chain IDs:A
Chain Length:410
Number of Molecules:1
Biological Source:HOMO SAPIENS
Primary Citation
Global Profiling of Co- and Post-Translationally N-Myristoylated Proteomes in Human Cells.
Nat.Commun. 5 4919 ? (2014)
PMID: 25255805 DOI: 10.1038/NCOMMS5919

Abstact

Protein N-myristoylation is a ubiquitous co- and post-translational modification that has been implicated in the development and progression of a range of human diseases. Here, we report the global N-myristoylated proteome in human cells determined using quantitative chemical proteomics combined with potent and specific human N-myristoyltransferase (NMT) inhibition. Global quantification of N-myristoylation during normal growth or apoptosis allowed the identification of >100 N-myristoylated proteins, >95% of which are identified for the first time at endogenous levels. Furthermore, quantitative dose response for inhibition of N-myristoylation is determined for >70 substrates simultaneously across the proteome. Small-molecule inhibition through a conserved substrate-binding pocket is also demonstrated by solving the crystal structures of inhibitor-bound NMT1 and NMT2. The presented data substantially expand the known repertoire of co- and post-translational N-myristoylation in addition to validating tools for the pharmacological inhibition of NMT in living cells.

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Primary Citation of related structures