4C05 image
Entry Detail
PDB ID:
4C05
Keywords:
Title:
Crystal structure of M. musculus protein arginine methyltransferase PRMT6 with SAH
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2013-07-31
Release Date:
2014-07-30
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.18
R-Value Work:
0.14
R-Value Observed:
0.16
Space Group:
I 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:PROTEIN ARGININE N-METHYLTRANSFERASE 6
Chain IDs:A
Chain Length:382
Number of Molecules:1
Biological Source:MUS MUSCULUS
Ligand Molecules
Primary Citation
Functional Insights from High Resolution Structures of Mouse Protein Arginine Methyltransferase 6.
J.Struct.Biol. 191 175 ? (2015)
PMID: 26094878 DOI: 10.1016/J.JSB.2015.06.017

Abstact

PRMT6 is a protein arginine methyltransferase involved in transcriptional regulation, human immunodeficiency virus pathogenesis, DNA base excision repair, and cell cycle progression. Like other PRMTs, PRMT6 is overexpressed in several cancer types and is therefore considered as a potential anti-cancer drug target. In the present study, we described six crystal structures of PRMT6 from Mus musculus, solved and refined at 1.34 Å for the highest resolution structure. The crystal structures revealed that the folding of the helix αX is required to stabilize a productive active site before methylation of the bound peptide can occur. In the absence of cofactor, metal cations can be found in the catalytic pocket at the expected position of the guanidinium moiety of the target arginine substrate. Using mass spectrometry under native conditions, we show that PRMT6 dimer binds two cofactor and a single H4 peptide molecules. Finally, we characterized a new site of in vitro automethylation of mouse PRMT6 at position 7.

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