4BUQ image
Entry Detail
PDB ID:
4BUQ
Keywords:
Title:
Crystal structure of wild type FimH lectin domain in complex with heptyl alpha-D-mannopyrannoside
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2013-06-23
Release Date:
2014-02-19
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:FIMH
Chain IDs:A, B
Chain Length:158
Number of Molecules:2
Biological Source:ESCHERICHIA COLI UTI89
Ligand Molecules
Primary Citation
Validation of Reactivity Descriptors to Assess the Aromatic Stacking within the Tyrosine Gate of Fimh
Acs Med.Chem.Lett. 4 1085 ? (2013)
PMID: 24900609 DOI: 10.1021/ML400269V

Abstact

Antagonists of the FimH adhesin, a protein almost universally present at the extremity of type-1 fimbriae expressed by Escherichia coli, have been abundantly in the spotlight as alternative treatments of urinary tract infections. The antagonists function as bacterial antiadhesives through highly specific α-d-mannose binding in a charged and polar pocket at the tip of the FimH lectin domain and by the stacking of alkyl or aromatic moieties substituted on the mannose with two tyrosine residues (Tyr48 and Tyr137) at the entrance of the mannose-binding pocket. Using high-resolution crystal data, interaction energies are calculated for the different observed aromatic stacking modes between the tyrosines and the antagonist. The dispersion component of the interaction energy correlates with the observed electron density. The quantum chemical reactivity descriptors local hardness and polarizability were successfully validated as prediction tools for ligand affinity in the tyrosine gate of FimH and therefore have potential for rapid drug screening.

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Primary Citation of related structures