4BPM image
Deposition Date 2013-05-27
Release Date 2014-04-16
Last Version Date 2024-05-08
Entry Detail
PDB ID:
4BPM
Keywords:
Title:
Crystal structure of a human integral membrane enzyme
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.08 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
H 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PROSTAGLANDIN E SYNTHASE, FUSION PEPTIDE
Gene (Uniprot):PTGES
Mutations:YES
Chain IDs:A
Chain Length:178
Number of Molecules:1
Biological Source:HOMO SAPIENS, SYNTHETIC CONSTRUCT
Primary Citation
Crystallizing Membrane Proteins in the Lipidic Mesophase. Experience with Human Prostaglandin E2 Synthase 1 and an Evolving Strategy.
Cryst.Growth Des. 14 2034 ? (2014)
PMID: 24803849 DOI: 10.1021/CG500157X

Abstact

The lipidic mesophase or in meso method for crystallizing membrane proteins has several high profile targets to its credit and is growing in popularity. Despite its success, the method is in its infancy as far as rational crystallogenesis is concerned. Consequently, significant time, effort, and resources are still required to generate structure-grade crystals, especially with a new target type. Therefore, a need exists for crystallogenesis protocols that are effective with a broad range of membrane protein types. Recently, a strategy for crystallizing a prokaryotic α-helical membrane protein, diacylglycerol kinase (DgkA), by the in meso method was reported (Cryst. Growth. Des.2013, 14, 2846-2857). Here, we describe its application to the human α-helical microsomal prostaglandin E2 synthase 1 (mPGES1). While the DgkA strategy proved useful, significant modifications were needed to generate structure-quality crystals of this important therapeutic target. These included protein engineering, using an additive phospholipid in the hosting mesophase, performing multiple rounds of salt screening, and carrying out trials at 4 °C in the presence of a tight binding ligand. The crystallization strategy detailed here should prove useful for generating structures of other integral membrane proteins by the in meso method.

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