4BP0 image
Deposition Date 2013-05-22
Release Date 2014-06-18
Last Version Date 2023-12-20
Entry Detail
PDB ID:
4BP0
Keywords:
Title:
Crystal structure of the closed form of Pseudomonas aeruginosa SPM-1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.24 Å
R-Value Free:
0.19
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:METALLO-B-LACTAMASE
Gene (Uniprot):spm-1
Chain IDs:A, B, C, D
Chain Length:250
Number of Molecules:4
Biological Source:PSEUDOMONAS AERUGINOSA
Primary Citation
Studying the active-site loop movement of the Sao Paolo metallo-beta-lactamase-1
Chem Sci 6 956 963 (2015)
PMID: 25717359 DOI: 10.1039/c4sc01752h

Abstact

Metallo-β-lactamases (MBLs) catalyse the hydrolysis of almost all β-lactam antibiotics. We report biophysical and kinetic studies on the São Paulo MBL (SPM-1), which reveal its Zn(ii) ion usage and mechanism as characteristic of the clinically important di-Zn(ii) dependent B1 MBL subfamily. Biophysical analyses employing crystallography, dynamic 19F NMR and ion mobility mass spectrometry, however, reveal that SPM-1 possesses loop and mobile element regions characteristic of the B2 MBLs. These include a mobile α3 region which is important in catalysis and determining inhibitor selectivity. SPM-1 thus appears to be a hybrid B1/B2 MBL. The results have implications for MBL evolution and inhibitor design.

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Primary Citation of related structures