4BKC image
Deposition Date 2013-04-23
Release Date 2013-11-27
Last Version Date 2024-10-16
Entry Detail
PDB ID:
4BKC
Keywords:
Title:
Crystal Structure of a unusually linked dimeric variant of Bet v 1
Biological Source:
Source Organism:
BETULA PENDULA (Taxon ID: 3505)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.73 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MAJOR POLLEN ALLERGEN BET V 1-A
Gene (Uniprot):BETVIA
Mutagens:YES
Chain IDs:A, B
Chain Length:159
Number of Molecules:2
Biological Source:BETULA PENDULA
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TSY A CYS ?
Primary Citation
Stabilization of the Dimeric Birch Pollen Allergen Bet V 1 Impacts its Immunological Properties
J.Biol.Chem. 289 540 ? (2014)
PMID: 24253036 DOI: 10.1074/JBC.M113.518795

Abstact

Many allergens share several biophysical characteristics, including the capability to undergo oligomerization. The dimerization mechanism in Bet v 1 and its allergenic properties are so far poorly understood. Here, we report crystal structures of dimeric Bet v 1, revealing a noncanonical incorporation of cysteine at position 5 instead of genetically encoded tyrosine. Cysteine polysulfide bridging stabilized different dimeric assemblies, depending on the polysulfide linker length. These dimers represent quaternary arrangements that are frequently observed in related proteins, reflecting their prevalence in unmodified Bet v 1. These conclusions were corroborated by characteristic immunologic properties of monomeric and dimeric allergen variants. Hereby, residue 5 could be identified as an allergenic hot spot in Bet v 1. The presented results refine fundamental principles in protein chemistry and emphasize the importance of protein modifications in understanding the molecular basis of allergenicity.

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Primary Citation of related structures