4BG2 image
Deposition Date 2013-03-22
Release Date 2013-04-03
Last Version Date 2024-10-09
Entry Detail
PDB ID:
4BG2
Keywords:
Title:
X-ray Crystal Structure of PatF from Prochloron didemni
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.13 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PATF
Gene (Uniprot):patF
Chain IDs:A, B
Chain Length:321
Number of Molecules:2
Biological Source:PROCHLORON DIDEMNI
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Primary Citation
Structure of Patf from Prochloron Didemni.
Acta Crystallogr.,Sect.F 69 618 ? (2013)
PMID: 23722837 DOI: 10.1107/S1744309113012931

Abstact

Patellamides are macrocyclic peptides with potent biological effects and are a subset of the cyanobactins. Cyanobactins are natural products that are produced by a series of enzymatic transformations and a common modification is the addition of a prenyl group. Puzzlingly, the pathway for patellamides in Prochloron didemni contains a gene, patF, with homology to prenylases, but patellamides are not themselves prenylated. The structure of the protein PatF was cloned, expressed, purified and determined. Prenylase activity could not be demonstrated for the protein, and examination of the structure revealed changes in side-chain identity at the active site. It is suggested that these changes have inactivated the protein. Attempts to mutate these residues led to unfolded protein.

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Primary Citation of related structures