ISDA

Deposition Date 2012-09-23

Release Date 2012-12-05

Last Version Date 2024-05-08

Entry Detail

PDB ID:

4BBH

Keywords:

TRANSFERASE

Title:

Plasmodium vivax N-myristoyltransferase with a bound benzothiophene inhibitor

Biological Source:

Source Organism:

PLASMODIUM VIVAX (Taxon ID: 5855)

Host Organism:

ESCHERICHIA COLI

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.63 Å

R-Value Free:

0.26

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

P 21 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE
Gene (Uniprot):PVX_085815
Chain IDs:A, B, C
Chain Length:384
Number of Molecules:3
Biological Source:PLASMODIUM VIVAX

UniProt ID:A5K1A2 Pfam ID:PF01233, PF02799 EC:2.3.1.97

Ligand Molecules

DMS

NHW

SO4

YBN

Primary Citation

Discovery of Novel and Ligand-Efficient Inhibitors of Plasmodium Falciparum and Plasmodium Vivax N-Myristoyltransferase.

Rackham, M.D, Brannigan, J.A, Moss, D.K, Yu, Z, Wilkinson, A.J, Holder, A.A, Tate, E.W, Leatherbarrow, R.J.Show

J.Med.Chem. 56 371 ? (2013)

PMID: 23170970 DOI: 10.1021/JM301474T

Abstact

N-Myristoyltransferase (NMT) is an attractive antiprotozoan drug target. A lead-hopping approach was utilized in the design and synthesis of novel benzo[b]thiophene-containing inhibitors of Plasmodium falciparum (Pf) and Plasmodium vivax (Pv) NMT. These inhibitors are selective against Homo sapiens NMT1 (HsNMT), have excellent ligand efficiency (LE), and display antiparasitic activity in vitro. The binding mode of this series was determined by crystallography and shows a novel binding mode for the benzothiophene ring.

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Protein

Chemical

Disease

Primary Citation of related structures