4B5C image
Deposition Date 2012-08-03
Release Date 2013-08-14
Last Version Date 2023-12-20
Entry Detail
PDB ID:
4B5C
Keywords:
Title:
Crystal structure of the peptidoglycan-associated lipoprotein from Burkholderia pseudomallei
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PUTATIVE OMPA FAMILY LIPOPROTEIN
Gene (Uniprot):pal
Chain IDs:A, B, C
Chain Length:138
Number of Molecules:3
Biological Source:BURKHOLDERIA PSEUDOMALLEI
Ligand Molecules
Primary Citation
Exploiting the Burkholderia Pseudomallei Acute Phase Antigen Bpsl2765 for Structure-Based Epitope Discovery/Design in Structural Vaccinology.
Chem.Biool. 20 1147 ? (2013)
PMID: 23993463 DOI: 10.1016/J.CHEMBIOL.2013.07.010

Abstact

We solved the crystal structure of Burkholderia pseudomallei acute phase antigen BPSL2765 in the context of a structural vaccinology study, in the area of melioidosis vaccine development. Based on the structure, we applied a recently developed method for epitope design that combines computational epitope predictions with in vitro mapping experiments and successfully identified a consensus sequence within the antigen that, when engineered as a synthetic peptide, was selectively immunorecognized to the same extent as the recombinant protein in sera from melioidosis-affected subjects. Antibodies raised against the consensus peptide were successfully tested in opsonization bacterial killing experiments and antibody-dependent agglutination tests of B. pseudomallei. Our strategy represents a step in the development of immunodiagnostics, in the production of specific antibodies and in the optimization of antigens for vaccine development, starting from structural and physicochemical principles.

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Primary Citation of related structures