4B50 image
Entry Detail
PDB ID:
4B50
Keywords:
Title:
Crystal structure of the HIV-1 gp41 MPER-specific llama VHH 2H10
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2012-08-02
Release Date:
2013-03-27
Method Details:
Experimental Method:
Resolution:
1.30 Å
R-Value Free:
0.17
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
I 2 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:2H10 LLAMA VHH
Chain IDs:A
Chain Length:122
Number of Molecules:1
Biological Source:LAMA GLAMA
Primary Citation

Abstact

The membrane proximal external region (MPER) of the HIV-1 glycoprotein gp41 is targeted by the broadly neutralizing antibodies 2F5 and 4E10. To date, no immunization regimen in animals or humans has produced HIV-1 neutralizing MPER-specific antibodies. We immunized llamas with gp41-MPER proteoliposomes and selected a MPER-specific single chain antibody (VHH), 2H10, whose epitope overlaps with that of mAb 2F5. Bi-2H10, a bivalent form of 2H10, which displayed an approximately 20-fold increased affinity compared to the monovalent 2H10, neutralized various sensitive and resistant HIV-1 strains, as well as SHIV strains in TZM-bl cells. X-ray and NMR analyses combined with mutagenesis and modeling revealed that 2H10 recognizes its gp41 epitope in a helical conformation. Notably, tryptophan 100 at the tip of the long CDR3 is not required for gp41 interaction but essential for neutralization. Thus bi-2H10 is an anti-MPER antibody generated by immunization that requires hydrophobic CDR3 determinants in addition to epitope recognition for neutralization similar to the mode of neutralization employed by mAbs 2F5 and 4E10.

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