4AZD image
Deposition Date 2012-06-25
Release Date 2012-07-25
Last Version Date 2023-12-20
Entry Detail
PDB ID:
4AZD
Keywords:
Title:
T57V mutant of aspartate decarboxylase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.62 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ASPARTATE 1-DECARBOXYLASE
Gene (Uniprot):panD
Mutations:YES
Chain IDs:A, B
Chain Length:143
Number of Molecules:2
Biological Source:ESCHERICHIA COLI
Ligand Molecules
Primary Citation
Threonine 57 is Required for the Post-Translational Activation of Escherichia Coli Aspartate Alpha-Decarboxylase
Acta Crystallogr.,Sect.D 70 1166 ? (2014)
PMID: 24699660 DOI: 10.1107/S1399004713034275

Abstact

Aspartate α-decarboxylase is a pyruvoyl-dependent decarboxylase required for the production of β-alanine in the bacterial pantothenate (vitamin B5) biosynthesis pathway. The pyruvoyl group is formed via the intramolecular rearrangement of a serine residue to generate a backbone ester intermediate which is cleaved to generate an N-terminal pyruvoyl group. Site-directed mutagenesis of residues adjacent to the active site, including Tyr22, Thr57 and Tyr58, reveals that only mutation of Thr57 leads to changes in the degree of post-translational activation. The crystal structure of the site-directed mutant T57V is consistent with a non-rearranged backbone, supporting the hypothesis that Thr57 is required for the formation of the ester intermediate in activation.

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Primary Citation of related structures