4AV2 image
Deposition Date 2012-05-23
Release Date 2012-10-17
Last Version Date 2024-05-08
Entry Detail
PDB ID:
4AV2
Title:
Single particle electron microscopy of PilQ dodecameric complexes from Neisseria meningitidis.
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
26.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TYPE IV PILUS BIOGENESIS AND COMPETENCE PROTEIN PILQ
Gene (Uniprot):pilQ
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:745
Number of Molecules:12
Biological Source:NEISSERIA MENINGITIDIS MC58
Polymer Type:polypeptide(L)
Molecule:PILP PROTEIN
Gene (Uniprot):pilP
Chain IDs:M, N, O, P, Q, R, S, T, U, V, W, X
Chain Length:181
Number of Molecules:12
Biological Source:NEISSERIA MENINGITIDIS MC58
Ligand Molecules
Primary Citation
Structure and Assembly of a Trans-Periplasmic Channel for Type Iv Pili in Neisseria Meningitidis.
Plos Pathog. 8 2923 ? (2012)
PMID: 23028322 DOI: 10.1371/JOURNAL.PPAT.1002923

Abstact

Type IV pili are polymeric fibers which protrude from the cell surface and play a critical role in adhesion and invasion by pathogenic bacteria. The secretion of pili across the periplasm and outer membrane is mediated by a specialized secretin protein, PilQ, but the way in which this large channel is formed is unknown. Using NMR, we derived the structures of the periplasmic domains from N. meningitidis PilQ: the N-terminus is shown to consist of two β-domains, which are unique to the type IV pilus-dependent secretins. The structure of the second β-domain revealed an eight-stranded β-sandwich structure which is a novel variant of the HSP20-like fold. The central part of PilQ consists of two α/β fold domains: the structure of the first of these is similar to domains from other secretins, but with an additional α-helix which links it to the second α/β domain. We also determined the structure of the entire PilQ dodecamer by cryoelectron microscopy: it forms a cage-like structure, enclosing a cavity which is approximately 55 Å in internal diameter at its largest extent. Specific regions were identified in the density map which corresponded to the individual PilQ domains: this allowed us to dock them into the cryoelectron microscopy density map, and hence reconstruct the entire PilQ assembly which spans the periplasm. We also show that the C-terminal domain from the lipoprotein PilP, which is essential for pilus assembly, binds specifically to the first α/β domain in PilQ and use NMR chemical shift mapping to generate a model for the PilP:PilQ complex. We conclude that passage of the pilus fiber requires disassembly of both the membrane-spanning and the β-domain regions in PilQ, and that PilP plays an important role in stabilising the PilQ assembly during secretion, through its anchorage in the inner membrane.

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Primary Citation of related structures