4APS image
Deposition Date 2012-04-05
Release Date 2012-06-13
Last Version Date 2024-05-08
Entry Detail
PDB ID:
4APS
Title:
Crystal structure of a POT family peptide transporter in an inward open conformation.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.30 Å
R-Value Free:
0.28
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DI-OR TRIPEPTIDE H+ SYMPORTER
Gene (Uniprot):dtpT
Chain IDs:A, B
Chain Length:491
Number of Molecules:2
Biological Source:STREPTOCOCCUS THERMOPHILUS
Ligand Molecules
Primary Citation
Alternating Access Mechanism in the Pot Family of Oligopeptide Transporters.
Embo J. 31 3411 ? (2012)
PMID: 22659829 DOI: 10.1038/EMBOJ.2012.157

Abstact

Short chain peptides are actively transported across membranes as an efficient route for dietary protein absorption and for maintaining cellular homeostasis. In mammals, peptide transport occurs via PepT1 and PepT2, which belong to the proton-dependent oligopeptide transporter, or POT family. The recent crystal structure of a bacterial POT transporter confirmed that they belong to the major facilitator superfamily of secondary active transporters. Despite the functional characterization of POT family members in bacteria, fungi and mammals, a detailed model for peptide recognition and transport remains unavailable. In this study, we report the 3.3-Å resolution crystal structure and functional characterization of a POT family transporter from the bacterium Streptococcus thermophilus. Crystallized in an inward open conformation the structure identifies a hinge-like movement within the C-terminal half of the transporter that facilitates opening of an intracellular gate controlling access to a central peptide-binding site. Our associated functional data support a model for peptide transport that highlights the importance of salt bridge interactions in orchestrating alternating access within the POT family.

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Primary Citation of related structures