4AM0 image
Entry Detail
PDB ID:
4AM0
Keywords:
Title:
Structure of Dengue virus strain 4 DIII in complex with Fab 2H12
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2012-03-06
Release Date:
2012-06-06
Method Details:
Experimental Method:
Resolution:
3.02 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:FAB 2H12, HEAVY CHAIN
Chain IDs:A, C, E, G (auth: H)
Chain Length:217
Number of Molecules:4
Biological Source:HOMO SAPIENS, MUS MUSCULUS
Polymer Type:polypeptide(L)
Description:FAB 2H12, LIGHT CHAIN
Chain IDs:B, D, F, H (auth: L)
Chain Length:212
Number of Molecules:4
Biological Source:HOMO SAPIENS, MUS MUSCULUS
Polymer Type:polypeptide(L)
Description:ENVELOPE PROTEIN,
Chain IDs:I (auth: Q), J (auth: R), K (auth: S), L (auth: T)
Chain Length:101
Number of Molecules:4
Biological Source:DENGUE VIRUS
Ligand Molecules
Primary Citation
Structural Analysis of a Dengue Cross-Reactive Antibody Complexed with Envelope Domain III Reveals the Molecular Basis of Cross-Reactivity.
J.Immunol. 188 4971 ? (2012)
PMID: 22491255 DOI: 10.4049/JIMMUNOL.1200227

Abstact

Dengue virus infections are still increasing at an alarming rate in tropical and subtropical countries, underlying the need for a dengue vaccine. Although it is relatively easy to generate Ab responses to dengue virus, low avidity or low concentrations of Ab may enhance infection of FcR-bearing cells with clinical impact, posing a challenge to vaccine production. In this article, we report the characterization of a mAb, 2H12, which is cross-reactive to all four serotypes in the dengue virus group. Crystal structures of 2H12-Fab in complex with domain III of the envelope protein from three dengue serotypes have been determined. 2H12 binds to the highly conserved AB loop of domain III of the envelope protein that is poorly accessible in the mature virion. 2H12 neutralization varied between dengue serotypes and strains; in particular, dengue serotype 2 was not neutralized. Because the 2H12-binding epitope was conserved, this variation in neutralization highlights differences between dengue serotypes and suggests that significant conformational changes in the virus must take place for Ab binding. Surprisingly, 2H12 facilitated little or no enhancement of infection. These data provide a structural basis for understanding Ab neutralization and enhancement of infection, which is crucial for the development of future dengue vaccines.

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