4AJP image
Deposition Date 2012-02-16
Release Date 2012-03-21
Last Version Date 2023-12-20
Entry Detail
PDB ID:
4AJP
Title:
Human LDHA in complex with 2-((4-(4-((3-((2-methyl-1,3-benzothiazol- 6yl)amino)-3-oxo-propyl)amino)-4-oxo-butyl)phenyl)methyl)propanedioic acid
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.38 Å
R-Value Free:
0.21
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:L-LACTATE DEHYDROGENASE A CHAIN
Gene (Uniprot):LDHA
Chain IDs:A, B, C, D
Chain Length:337
Number of Molecules:4
Biological Source:HOMO SAPIENS
Primary Citation
The Design and Synthesis of Novel Lactate Dehydrogenase a Inhibitors by Fragment-Based Lead Generation
J.Med.Chem. 55 3285 ? (2012)
PMID: 22417091 DOI: 10.1021/JM201734R

Abstact

Lactate dehydrogenase A (LDHA) catalyzes the conversion of pyruvate to lactate, utilizing NADH as a cofactor. It has been identified as a potential therapeutic target in the area of cancer metabolism. In this manuscript we report our progress using fragment-based lead generation (FBLG), assisted by X-ray crystallography to develop small molecule LDHA inhibitors. Fragment hits were identified through NMR and SPR screening and optimized into lead compounds with nanomolar binding affinities via fragment linking. Also reported is their modification into cellular active compounds suitable for target validation work.

Legend

Protein

Chemical

Disease

Primary Citation of related structures