4ACO image
Deposition Date 2011-12-16
Release Date 2012-01-11
Last Version Date 2024-05-08
Entry Detail
PDB ID:
4ACO
Title:
Structure of the budding yeast Ndc10 N-terminal domain
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.89 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:CENTROMERE DNA-BINDING PROTEIN COMPLEX CBF3 SUBUNIT A
Gene (Uniprot):CBF2
Chain IDs:A
Chain Length:956
Number of Molecules:1
Biological Source:SACCHAROMYCES CEREVISIAE
Primary Citation
The Structure of the Yeast Kinetochore Ndc10 DNA-Binding Domain Reveals an Unexpected Evolutionary Relationship to Tyrosine Recombinases.
J.Biol.Chem. 287 5173 ? (2012)
PMID: 22215672 DOI: 10.1074/JBC.C111.318501

Abstact

We have solved the x-ray structure of the N-terminal half of the yeast kinetochore protein Ndc10 at 1.9 Å resolution. This essential protein is a key constituent of the budding yeast centromere and is essential for the recruitment of the centromeric nucleosome and establishment of the kinetochore. The fold of the protein shows unexpected similarities to the tyrosine recombinase/λ-integrase family of proteins, most notably Cre, with some variation in the relative position of the subdomains. This finding offers new insights into kinetochore evolution and the adaptation of a well studied protein fold to a novel role. By comparison with tyrosine recombinases and mutagenesis studies, we have been able to define some of the key DNA-binding motifs.

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