4A8J image
Deposition Date 2011-11-21
Release Date 2012-02-22
Last Version Date 2024-10-23
Entry Detail
PDB ID:
4A8J
Keywords:
Title:
Crystal Structure of the Elongator subcomplex Elp456
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Elongator complex protein 4
Gene (Uniprot):ELP4
Chain IDs:A, D
Chain Length:361
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Molecule:Elongator complex protein 5
Gene (Uniprot):IKI1
Chain IDs:B, E
Chain Length:270
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Molecule:Elongator complex protein 6
Gene (Uniprot):ELP6
Chain IDs:C, F
Chain Length:280
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae S288C
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Primary Citation
The Elongator Subcomplex Elp456 is a Hexameric Reca-Like ATPase.
Nat.Struct.Mol.Biol. 19 314 ? (2012)
PMID: 22343726 DOI: 10.1038/NSMB.2234

Abstact

Elongator was initially described as an RNA polymerase II-associated factor but has since been associated with a broad range of cellular activities. It has also attracted clinical attention because of its role in certain neurodegenerative diseases. Here we describe the crystal structure of the Saccharomyces cerevisiae subcomplex of Elongator proteins 4, 5 and 6 (Elp456). The subunits each show almost identical RecA folds that form a heterohexameric ring-like structure resembling hexameric RecA-like ATPases. This structural finding is supported by different complementary in vitro and in vivo approaches, including the specific binding of the hexameric Elp456 subcomplex to tRNAs in a manner regulated by ATP. Our results support a role of Elongator in tRNA modification, explain the importance of each of the Elp4, Elp5 and Elp6 subunits for complex integrity and suggest a model for the overall architecture of the holo-Elongator complex.

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