4A4B image
Deposition Date 2011-10-08
Release Date 2012-01-25
Last Version Date 2024-11-13
Entry Detail
PDB ID:
4A4B
Title:
Structure of modified phosphoTyr371-c-Cbl-UbcH5B-ZAP-70 complex
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.79 Å
R-Value Free:
0.26
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 65 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:E3 UBIQUITIN-PROTEIN LIGASE CBL
Gene (Uniprot):CBL
Mutations:YES
Chain IDs:A
Chain Length:391
Number of Molecules:1
Biological Source:HOMO SAPIENS
Polymer Type:polypeptide(L)
Molecule:TYROSINE-PROTEIN KINASE ZAP-70
Gene (Uniprot):ZAP70
Chain IDs:B
Chain Length:12
Number of Molecules:1
Biological Source:HOMO SAPIENS
Polymer Type:polypeptide(L)
Molecule:UBIQUITIN-CONJUGATING ENZYME E2 D2
Gene (Uniprot):UBE2D2
Chain IDs:C
Chain Length:147
Number of Molecules:1
Biological Source:HOMO SAPIENS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PTR A TYR O-PHOSPHOTYROSINE
Primary Citation
Structural Basis for Autoinhibition and Phosphorylation-Dependent Activation of C-Cbl
Nat.Struct.Mol.Biol. 19 184 ? (2012)
PMID: 22266821 DOI: 10.1038/NSMB.2231

Abstact

Cbls are RING ubiquitin ligases that attenuate receptor tyrosine kinase (RTK) signal transduction. Cbl ubiquitination activity is stimulated by phosphorylation of a linker helix region (LHR) tyrosine residue. To elucidate the mechanism of activation, we determined the structures of human CBL, a CBL-substrate peptide complex and a phosphorylated-Tyr371-CBL-E2-substrate peptide complex, and we compared them with the known structure of a CBL-E2-substrate peptide complex. Structural and biochemical analyses show that CBL adopts an autoinhibited RING conformation, where the RING's E2-binding surface associates with CBL to reduce E2 affinity. Tyr371 phosphorylation activates CBL by inducing LHR conformational changes that eliminate autoinhibition, flip the RING domain and E2 into proximity of the substrate-binding site and transform the RING domain into an enhanced E2-binding module. This activation is required for RTK ubiquitination. Our results present a mechanism for regulation of c-Cbl's activity by autoinhibition and phosphorylation-induced activation.

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Primary Citation of related structures