3b07 image
Deposition Date 2011-06-06
Release Date 2011-10-12
Last Version Date 2023-11-01
Entry Detail
PDB ID:
3B07
Keywords:
Title:
Crystal structure of octameric pore form of gamma-hemolysin from Staphylococcus aureus
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.23
R-Value Work:
0.20
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Gamma-hemolysin component B
Chain IDs:A, B (auth: C), C (auth: E), D (auth: G)
Chain Length:309
Number of Molecules:4
Biological Source:Staphylococcus aureus
Polymer Type:polypeptide(L)
Molecule:Gamma-hemolysin component A
Gene (Uniprot):hlgA
Chain IDs:E (auth: B), F (auth: D), G (auth: F), H
Chain Length:290
Number of Molecules:4
Biological Source:Staphylococcus aureus
Ligand Molecules
Primary Citation
Crystal structure of the octameric pore of staphylococcal gamma-hemolysin reveals the beta-barrel pore formation mechanism by two components
Proc.Natl.Acad.Sci.USA 108 17314 17319 (2011)
PMID: 21969538 DOI: 10.1073/pnas.1110402108

Abstact

Staphylococcal γ-hemolysin is a bicomponent pore-forming toxin composed of LukF and Hlg2. These proteins are expressed as water-soluble monomers and then assemble into the oligomeric pore form on the target cell. Here, we report the crystal structure of the octameric pore form of γ-hemolysin at 2.5 Å resolution, which is the first high-resolution structure of a β-barrel transmembrane protein composed of two proteins reported to date. The octameric assembly consists of four molecules of LukF and Hlg2 located alternately in a circular pattern, which explains the biochemical data accumulated over the past two decades. The structure, in combination with the monomeric forms, demonstrates the elaborate molecular machinery involved in pore formation by two different molecules, in which interprotomer electrostatic interactions using loops connecting β2 and β3 (loop A: Asp43-Lys48 of LukF and Lys37-Lys43 of Hlg2) play pivotal roles as the structural determinants for assembly through unwinding of the N-terminal β-strands (amino-latch) of the adjacent protomer, releasing the transmembrane stem domain folded into a β-sheet in the monomer (prestem), and interaction with the adjacent protomer.

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