3ZU4 image
Deposition Date 2011-07-13
Release Date 2012-01-18
Last Version Date 2024-05-08
Entry Detail
PDB ID:
3ZU4
Keywords:
Title:
Structure of the enoyl-ACP reductase FabV from Yersinia pestis with the cofactor NADH and the 2-pyridone inhibitor PT172
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.01 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PUTATIVE REDUCTASE YPO4104/Y4119/YP_4011
Gene (Uniprot):fabV
Chain IDs:A
Chain Length:405
Number of Molecules:1
Biological Source:YERSINIA PESTIS
Primary Citation
Structure of the Yersinia Pestis Fabv Enoyl-Acp Reductase and its Interaction with Two 2-Pyridone Inhibitors
Structure 20 89 ? (2012)
PMID: 22244758 DOI: 10.1016/J.STR.2011.07.019

Abstact

The recently discovered FabV enoyl-ACP reductase, which catalyzes the last step of the bacterial fatty acid biosynthesis (FAS-II) pathway, is a promising but unexploited drug target against the reemerging pathogen Yersinia pestis. The structure of Y. pestis FabV in complex with its cofactor reveals that the enzyme features the common architecture of the short-chain dehydrogenase reductase superfamily, but contains additional structural elements that are mostly folded around the usually flexible substrate-binding loop, thereby stabilizing it in a very tight conformation that seals the active site. The structures of FabV in complex with NADH and two newly developed 2-pyridone inhibitors provide insights for the development of new lead compounds, and suggest a mechanism by which the substrate-binding loop opens to admit the inhibitor, a motion that could also be coupled to the interaction of FabV with the acyl-carrier protein substrate.

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