3ZPD image
Deposition Date 2013-02-27
Release Date 2014-02-12
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3ZPD
Keywords:
Title:
Solution structure of the FimH adhesin carbohydrate-binding domain
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
50
Conformers Submitted:
25
Selection Criteria:
LOWEST OVERALL ENERGY
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FIMH
Gene (Uniprot):fimH
Chain IDs:A
Chain Length:158
Number of Molecules:1
Biological Source:ESCHERICHIA COLI
Ligand Molecules
Primary Citation
Study of the Structural and Dynamic Effects in the Fimh Adhesin Upon Alpha-D-Heptyl Mannose Binding.
J.Med.Chem. 57 1416 ? (2014)
PMID: 24476493 DOI: 10.1021/JM401666C

Abstact

Uropathogenic Escherichia coli cause urinary tract infections by adhering to mannosylated receptors on the human urothelium via the carbohydrate-binding domain of the FimH adhesin (FimHL). Numerous α-d-mannopyranosides, including α-d-heptyl mannose (HM), inhibit this process by interacting with FimHL. To establish the molecular basis of the high-affinity HM binding, we solved the solution structure of the apo form and the crystal structure of the FimHL-HM complex. NMR relaxation analysis revealed that protein dynamics were not affected by the sugar binding, yet HM addition promoted protein dimerization, which was further confirmed by small-angle X-ray scattering. Finally, to address the role of Y48, part of the "tyrosine gate" believed to govern the affinity and specificity of mannoside binding, we characterized the FimHL Y48A mutant, whose conformational, dynamical, and HM binding properties were found to be very similar to those of the wild-type protein.

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Primary Citation of related structures