3ZJF image
Deposition Date 2013-01-17
Release Date 2013-03-06
Last Version Date 2023-12-20
Entry Detail
PDB ID:
3ZJF
Keywords:
Title:
A20 OTU domain with irreversibly oxidised Cys103 from 270 min H2O2 soak.
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:A20P50
Gene (Uniprot):TNFAIP3
Mutations:YES
Chain IDs:A
Chain Length:366
Number of Molecules:1
Biological Source:HOMO SAPIENS
Polymer Type:polypeptide(L)
Molecule:A20P50
Gene (Uniprot):TNFAIP3
Mutations:YES
Chain IDs:B
Chain Length:366
Number of Molecules:1
Biological Source:HOMO SAPIENS
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSD A CYS 3-SULFINOALANINE
OCS B CYS CYSTEINESULFONIC ACID
Ligand Molecules
Primary Citation
Regulation of A20 and Other Otu Deubiquitinases by Reversible Oxidation
Nat.Commun. 4 1569 ? (2013)
PMID: 23463012 DOI: 10.1038/NCOMMS2567

Abstact

Protein ubiquitination is a highly versatile post-translational modification that regulates as diverse processes as protein degradation and kinase activation. Deubiquitinases hydrolyse ubiquitin modifications from proteins and are hence key regulators of the ubiquitin system. Ovarian tumour deubiquitinases comprise a family of fourteen human enzymes, many of which regulate cellular signalling pathways. Ovarian tumour deubiquitinases are cysteine proteases that cleave polyubiquitin chains in vitro and in cells, but little is currently known about their regulation. Here we show that ovarian tumour deubiquitinases are susceptible to reversible oxidation of the catalytic cysteine residue. High-resolution crystal structures of the catalytic domain of A20 in four different oxidation states reveal that the reversible form of A20 oxidation is a cysteine sulphenic acid intermediate, which is stabilised by the architecture of the catalytic centre. Using chemical tools to detect sulphenic acid intermediates, we show that many ovarian tumour deubiquitinases undergo reversible oxidation upon treatment with H2O2, revealing a new mechanism to regulate deubiquitinase activity.

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Primary Citation of related structures