3ZJ8 image
Deposition Date 2013-01-17
Release Date 2014-02-05
Last Version Date 2023-12-20
Entry Detail
PDB ID:
3ZJ8
Keywords:
Title:
Crystal structure of strictosidine glucosidase in complex with inhibitor-2
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.01 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 4 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:STRICTOSIDINE-O-BETA-D-GLUCOSIDASE
Gene (Uniprot):SGR1
Chain IDs:A, B
Chain Length:532
Number of Molecules:2
Biological Source:RAUVOLFIA SERPENTINA
Ligand Molecules
Primary Citation
Ligand Structures of Synthetic Deoxa-Pyranosylamines with Raucaffricine and Strictosidine Glucosidases Provide Structural Insights Into Their Binding and Inhibitory Behaviours.
J.Enzyme.Inhib.Med.Chem. 30 472 ? (2015)
PMID: 25140865 DOI: 10.3109/14756366.2014.949252

Abstact

Insight into the structure and inhibition mechanism of O-β-d-glucosidases by deoxa-pyranosylamine type inhibitors is provided by X-ray analysis of complexes between raucaffricine and strictosidine glucosidases and N-(cyclohexylmethyl)-, N-(cyclohexyl)- and N-(bromobenzyl)-β-d-gluco-1,5-deoxa-pyranosylamine. All inhibitors anchored exclusively in the catalytic active site by competition with appropriate enzyme substrates. Thus facilitated prospective elucidation of the binding networks with residues located at <3.9 Å distance will enable the development of potent inhibitors suitable for the production of valuable alkaloid glucosides, raucaffricine and strictosidine, by means of synthesis in Rauvolfia serpentina cell suspension cultures.

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Primary Citation of related structures